Browse of TCMCG006C55404 protein

CDS

Accession Number	TCMCG006C55404
gbkey	CDS
Protein Id	XP_013725091.1
Location	complement(join(23455256..23455360,23455442..23455651,23455752..23456282,23456395..23456616,23456836..23456966,23457116..23458202,23458294..23458371,23458455..23458526,23458994..23459538,23459611..23459737))
Gene	LOC106428886
GeneID	106428886
Organism	Brassica napus

Protein

Length	1035aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013869637.2
Definition	helicase-like transcription factor CHR27 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	SNF2 domain-containing protein helicase domain-containing protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15173        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04918        [VIEW IN KEGG] map04918        [VIEW IN KEGG]
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006304        [VIEW IN EMBL-EBI] GO:0006305        [VIEW IN EMBL-EBI] GO:0006306        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009892        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0010605        [VIEW IN EMBL-EBI] GO:0010629        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016458        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0031047        [VIEW IN EMBL-EBI] GO:0032259        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0043414        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044728        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048519        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0080188        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGATGGAATCCGCTATTGAAATCAGTTCAGGCAGTAGTAGTATTAGTAGTAGTGATGAAGAGGAGGTATCAGAAGAGCCCATTAAAGAAGAAGTTAGAACCAGGAAGAATCCCCCTTGGCTAGATGGCAGCACTAGTTTTCCTCAAAAGGGTTCCTCTGCTGCTAATACTCAACCTACACCTAGACCTCCAAATCCAGCTTCTCGCTATGGTGCTCCACGTTATGCATCTCGGCCAAGAGACAGCTCTAGAACTACTACTAGAGGGAATGACAAGAGCATCGTTAACTCGAGGACTTCAATTGTTTCTTCTCAACAACCTCTGAAAAGAACCCTTCCGCCATCTTTTAATACGACTCCTATTCCTCCAAGAAGTGCTTCCAACGGTGTAAGCCATGGCAACGCGGGTCGCTTTGGTGCGGACTATAGTAGTAGTTCTGCTGTAAGCAACAAGAGTGCGTTTGGTGATCGTCACCGTGGAGCTCATTCTGAGATAGGAATTCACCGTGGCATGAATGGGGTTAGGATCCTCCCTCCGTCTATGACCATTGGAACATCTGCATCCTCTCCGTTACATTATGGTGGTCCAAGCGATCCAATTCACAGGGTTGGCGTTGGTGAAGATATGAATTCTGAGAACGATGAGAGGTTGATCTATCAGGCTGCGCTACAGGATTTGAATCAACCCAAGACCGAGATTGATCTACCTCCTGGTATTCTTTCAGTTCCTCTTATGAGGCATCAGAAAATTGCATTGGCGTGGATGTTTCAGAAGGAAACAACTAGTTTGCACTGTTCGGGAGGGATATTAGCAGATGATCAGGGACTTGGTAAGACAGTTTCGATGATTGCTCTTATCCTGAAGCAAAAGTTTGAGTCACAACTGAAGTCTGAAATCTCAACCAAGGGAGAAGCTGAAATATTGGACCTGGATGCTGATGATGAGTTAGAAAATGCAAAGCATGAAAGTAAAAGTCATGCAAAACCAGAGCTCAATTCAAGGAACAGTGAGACCACGGTTCTGTCTATTAAGGAAGAAGCTGAAATATTGGATCTGGATGCTTATGATGAGTCAGAAAATGCAAAACATGAGAGCGAAAGTCACGCAAAAACAGAGCTCAAGGTTTTAACCAACAGTGAGACCACGGTTCTGAGTGTTGGTGATAGTGATGAGAATGACAGTTCAGATGCGGAGAAAGTCAAAGATGAAGAAGTGAGTACTTCAGTAAGGGAGTTTAAAAGAAAGAGACCAGCTGCTGGTACATTAGTTGTTTGTCCAGCGAGTCTTGTGAGGCAATGGGCAAGAGAGCTTGATGAGAAGGTTTCTGATGAATCTAAACTTTCTGTTTTAGTCTACCATGGTGGTAATAGGACCAAAGATCCTGTGGAGTTAGCAAAATATGATGTGGTTGTCACAACTTACGCCATTGTTACCAATGAAGCTCCCAAACAGTCCTTGTTGGACGATGATGAGAACGATGAAGACAATAACCAAAAACATGGCAACAAGAAGAAACGTAAGGTTGCAATGAAGGCCAGTAAGAAGAGTAAGAAAAGAGGTAGAAAAAGCATGGACGGTTCTTCTTTCGACTCTGATTGTGGTACTTTATCAAGAGTTGGTTGGCTCAGAGTAGTACTAGACGAAGCTCAGACAATTAAGAATCATACAACACAAGTGGCAAGAGCTTGTTGCACTCTTCGAGCCAAGAGGAGGTGGTGTTTGTCTGGAACGCCAATTCAAAATACGATTGATGATCTATACAGCTATTTCAGGTTCCTTAGATATAATCCGTATGCTGTGTACAAGTCATTTTACCATACAATCAAGGTTCCAATTTCCAAAAGTTCTCTTCATGGTTACAAAAAGCTTCAAGCTGTTCTAAAGGCTATAATGCTGCGCCGTACAAAAGGAACATTGCTTGATGGGAAACCCATTATTAATCTACCTCCAAAGAAAATTAGCTTGAGCAAAGTGGACTTTTCAGTGGAGGAGCGCTCTTTCTACAAGAAGCTTGAAGCAGATTCACGATCACAATTCAAGGCTTATGCTGCTGCAGGAACTTTGGGCCAAAACTACGGAAATATTCTTCTGATGCTTTTGCGTCTACGCCAAGCTTGTGACCACCCACAACTTGTTAACGGGTACAACTCAGATCCTCTTGGAAAAGAATCAGAAGAAGCAGTCGAAAGACTCCCTAGGGAGGCTCGAATCAACCTGCTCAATCGTTTAGAGTCATCATCTGCCATCTGCAATATATGTGATGATCCACCGGAAAACCCTGTTGTTACGCTGTGTGGGCATGTATTTTGCTATCAGTGTGCTTCAGAACATATCACTGGGGATGAGAACGTGTGCCCTGTACGGAGATGCAGAGAAGACATTGGGCGTGATGTGGTTTTCTCCGAATCTTCCCTTAGAAAATGCATCACCAATGATACAGGATGTAGTTCTTCACAGGATAGATCAGCTCTTCAAAAAAGCGAGTTTAGTTCATCAAAAATCAAGGCTGTCCTAGATATCCTGAAGTCGCTTTCCGAACATGGTCAAATGCCTTCTTCCTCACAGCCACATGACGATGACGATGATGTTACCATTATAGAGCCAACGACTCTTCACTCATCTTCACCTAACCAGGGGCCAATAAAGACGATAGTATTCTCTCAGTGGACGGGTATGCTTGACTTGGTTGAGCTGAGTTTTATTGAAAATGGTATTGAATTCAGAAGATTAGATGGAACAATGAGTCTAGCAGCAAGAGACAGGGCTGTAAAAGAATTCAGCAATGATCCAGATGTAGAGGTGATGCTGATGTCGCTAAAAGCTGGAAACCTTGGGTTGAATATGGTAAATGCATGTCATGTTATTCTTCTGGATCTTTGGTGGAATCCAACAACCGAAGATCAAGCTATTGATCGTGCACATCGTATTGGACAAACTCGGCCAGTTAGTGTAACTCGCATCACTATAAAAGGCACCGTTGAGGATAGAATTTTGTTACTTCAGGAAGAGAAAAGGAAGATTGTTGCATCTGCGTATGGTGAAGAGCATGGTGGAAGCTCTGCCACTCGACTGACAGTTGACGATCTCAAGTATCTTTTTATGGTGTAG

Protein:   MMESAIEISSGSSSISSSDEEEVSEEPIKEEVRTRKNPPWLDGSTSFPQKGSSAANTQPTPRPPNPASRYGAPRYASRPRDSSRTTTRGNDKSIVNSRTSIVSSQQPLKRTLPPSFNTTPIPPRSASNGVSHGNAGRFGADYSSSSAVSNKSAFGDRHRGAHSEIGIHRGMNGVRILPPSMTIGTSASSPLHYGGPSDPIHRVGVGEDMNSENDERLIYQAALQDLNQPKTEIDLPPGILSVPLMRHQKIALAWMFQKETTSLHCSGGILADDQGLGKTVSMIALILKQKFESQLKSEISTKGEAEILDLDADDELENAKHESKSHAKPELNSRNSETTVLSIKEEAEILDLDAYDESENAKHESESHAKTELKVLTNSETTVLSVGDSDENDSSDAEKVKDEEVSTSVREFKRKRPAAGTLVVCPASLVRQWARELDEKVSDESKLSVLVYHGGNRTKDPVELAKYDVVVTTYAIVTNEAPKQSLLDDDENDEDNNQKHGNKKKRKVAMKASKKSKKRGRKSMDGSSFDSDCGTLSRVGWLRVVLDEAQTIKNHTTQVARACCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYNPYAVYKSFYHTIKVPISKSSLHGYKKLQAVLKAIMLRRTKGTLLDGKPIINLPPKKISLSKVDFSVEERSFYKKLEADSRSQFKAYAAAGTLGQNYGNILLMLLRLRQACDHPQLVNGYNSDPLGKESEEAVERLPREARINLLNRLESSSAICNICDDPPENPVVTLCGHVFCYQCASEHITGDENVCPVRRCREDIGRDVVFSESSLRKCITNDTGCSSSQDRSALQKSEFSSSKIKAVLDILKSLSEHGQMPSSSQPHDDDDDVTIIEPTTLHSSSPNQGPIKTIVFSQWTGMLDLVELSFIENGIEFRRLDGTMSLAARDRAVKEFSNDPDVEVMLMSLKAGNLGLNMVNACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVSVTRITIKGTVEDRILLLQEEKRKIVASAYGEEHGGSSATRLTVDDLKYLFMV